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158
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BIBM
2008
IEEE
110views Bioinformatics» more  BIBM 2008»
16 years 19 days ago
Genome Alignments Using MPI-LAGAN
We develop a parallel algorithm for a widely used whole genome alignment method called LAGAN. We use the MPI-based protocol to develop parallel solutions for two phases of the alg...
Ruinan Zhang, Huzefa Rangwala, George Karypis
186
Voted
IPPS
1999
IEEE
15 years 10 months ago
Visualization and Performance Prediction of Multithreaded Solaris Programs by Tracing Kernel Threads
Efficient performance tuning of parallel programs is often hard. We present a performance prediction and visualization tool called VPPB. Based on a monitored uni-processor executi...
Magnus Broberg, Lars Lundberg, Håkan Grahn
IPPS
1998
IEEE
15 years 10 months ago
Efficient Runtime Thread Management for the Nano-Threads Programming Model
Abstract. The nano-threads programming model was proposed to effectively integrate multiprogramming on shared-memory multiprocessors, with the exploitation of fine-grain parallelis...
Dimitrios S. Nikolopoulos, Eleftherios D. Polychro...
CAP
2010
15 years 1 months ago
Polynomial homotopies on multicore workstations
Homotopy continuation methods to solve polynomial systems scale very well on parallel machines. In this paper we examine its parallel implementation on multiprocessor multicore wo...
Jan Verschelde, Genady Yoffe
141
Voted
HPCS
2007
IEEE
16 years 14 days ago
The Coast-to-Coast Seminar and Remote Mathematical Collaboration
—We describe a shared Simon Fraser University (WestGrid) and Dalhousie (ACEnet) seminar series which is now two years old, and is gradually expanding to include other Canadian un...
Jonathan M. Borwein, David Langstroth, Mason S. Ma...