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IPPS
2010
IEEE
14 years 11 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
128
Voted
PDP
2009
IEEE
15 years 8 months ago
A Parallel Implementation of the 2D Wavelet Transform Using CUDA
There is a multicore platform that is currently concentrating an enormous attention due to its tremendous potential in terms of sustained performance: the NVIDIA Tesla boards. The...
Joaquín Franco, Gregorio Bernabé, Ju...
IPPS
2009
IEEE
15 years 8 months ago
Predictive analysis and optimisation of pipelined wavefront computations
Pipelined wavefront computations are a ubiquitous class of parallel algorithm used for the solution of a num­ ber of scientific and engineering applications. This paper investig...
Gihan R. Mudalige, Simon D. Hammond, J. A. Smith, ...
MICRO
2012
IEEE
285views Hardware» more  MICRO 2012»
13 years 4 months ago
Automatic Extraction of Coarse-Grained Data-Flow Threads from Imperative Programs
This article presents a general algorithm for transforming sequential imperative programs into parallel data-flow programs. Our algorithm operates on a program dependence graph i...
Feng Li, Antoniu Pop, Albert Cohen
MICCAI
2002
Springer
16 years 2 months ago
Robust Registration of Multi-modal Images: Towards Real-Time Clinical Applications
Abstract. High performance computing has become a key step to introduce computer tools, like real-time registration, in the medical field. To achieve real-time processing, one usua...
Radu Stefanescu, Sébastien Ourselin, Xavier...