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IPPS
2010
IEEE
14 years 7 months ago
pFANGS: Parallel high speed sequence mapping for Next Generation 454-roche Sequencing reads
Millions of DNA sequences (reads) are generated by Next Generation Sequencing machines everyday. There is a need for high performance algorithms to map these sequences to the refer...
Sanchit Misra, Ramanathan Narayanan, Wei-keng Liao...
PDP
2009
IEEE
15 years 4 months ago
A Parallel Implementation of the 2D Wavelet Transform Using CUDA
There is a multicore platform that is currently concentrating an enormous attention due to its tremendous potential in terms of sustained performance: the NVIDIA Tesla boards. The...
Joaquín Franco, Gregorio Bernabé, Ju...
IPPS
2009
IEEE
15 years 4 months ago
Predictive analysis and optimisation of pipelined wavefront computations
Pipelined wavefront computations are a ubiquitous class of parallel algorithm used for the solution of a num­ ber of scientific and engineering applications. This paper investig...
Gihan R. Mudalige, Simon D. Hammond, J. A. Smith, ...
MICRO
2012
IEEE
285views Hardware» more  MICRO 2012»
12 years 12 months ago
Automatic Extraction of Coarse-Grained Data-Flow Threads from Imperative Programs
This article presents a general algorithm for transforming sequential imperative programs into parallel data-flow programs. Our algorithm operates on a program dependence graph i...
Feng Li, Antoniu Pop, Albert Cohen
MICCAI
2002
Springer
15 years 10 months ago
Robust Registration of Multi-modal Images: Towards Real-Time Clinical Applications
Abstract. High performance computing has become a key step to introduce computer tools, like real-time registration, in the medical field. To achieve real-time processing, one usua...
Radu Stefanescu, Sébastien Ourselin, Xavier...