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ISMB
1994
15 years 7 months ago
High Speed Pattern Matching in Genetic Data Base with Reconfigurable Hardware
Homologydetection in large data bases is probably the most time consuming operation in molecular genetic computing systems. Moreover, the progresses made all around the world conc...
Eric Lemoine, Joël Quinqueton, Jean Sallantin
HPDC
2010
IEEE
15 years 7 months ago
Multi-GPU volume rendering using MapReduce
In this paper we present a multi-GPU parallel volume rendering implemention built using the MapReduce programming model. We give implementation details of the library, including s...
Jeff A. Stuart, Cheng-Kai Chen, Kwan-Liu Ma, John ...
IPPS
2010
IEEE
15 years 4 months ago
Optimization of linked list prefix computations on multithreaded GPUs using CUDA
We present a number of optimization techniques to compute prefix sums on linked lists and implement them on multithreaded GPUs using CUDA. Prefix computations on linked structures ...
Zheng Wei, Joseph JáJá
IPPS
2009
IEEE
16 years 26 days ago
High-order stencil computations on multicore clusters
Stencil computation (SC) is of critical importance for broad scientific and engineering applications. However, it is a challenge to optimize complex, highorder SC on emerging clus...
Liu Peng, Richard Seymour, Ken-ichi Nomura, Rajiv ...
SPAA
1997
ACM
15 years 10 months ago
Pipelining with Futures
Pipelining has been used in the design of many PRAM algorithms to reduce their asymptotic running time. Paul, Vishkin, and Wagener (PVW) used the approach in a parallel implementat...
Guy E. Blelloch, Margaret Reid-Miller