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CSB
2005
IEEE
139views Bioinformatics» more  CSB 2005»
15 years 9 months ago
Using Parallel Algorithms for Searching Molecular Sequence Databases
This work presents the development of algorithms for approximate string matching using parallel methods. It intends to do the maximum of molecular sequences comparisons per unity ...
Carla Correa Tavares dos Reis, Rubem P. Mondaini
IPPS
2003
IEEE
15 years 8 months ago
Parallel Tabu Search in a Heterogeneous Environment
In this paper, we discuss a parallel tabu search algorithm with implementation in a heterogeneous environment. Two parallelization strategies are integrated: functional decomposit...
Ahmad A. Al-Yamani, Sadiq M. Sait, Hassan Barada, ...
IPPS
2003
IEEE
15 years 8 months ago
Parallel Detection of Regulatory Elements with gMP
The detection of regulatory elements from a large set of regulatory regions is a challenging problem in computational genomics. However, computational methods to extract this biol...
Bertil Schmidt, Lin Feng, Amey V. Laud, Yusdi Sant...
KES
1999
Springer
15 years 7 months ago
Parallel genetic algorithm taxonomy
—Genetic Algorithms (GAs) are powerful search techniques that are used to solve difficult problems in many disciplines. Unfortunately, they can be very demanding in terms of com...
Mariusz Nowostawski, Riccardo Poli
ISCOPE
1998
Springer
15 years 7 months ago
Parallel Object Oriented Monte Carlo Simulations
Abstract. We discuss the parallelization and object-oriented implementation of Monte Carlo simulations for physical problems. We present a C++ Monte Carlo class library for the aut...
Matthias Troyer, Beat Ammon, Elmar Heeb