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PPOPP
2012
ACM
13 years 11 months ago
A methodology for creating fast wait-free data structures
Lock-freedom is a progress guarantee that ensures overall program progress. Wait-freedom is a stronger progress guarantee that ensures the progress of each thread in the program. ...
Alex Kogan, Erez Petrank
WWW
2007
ACM
16 years 4 months ago
Parallel crawling for online social networks
Given a huge online social network, how do we retrieve information from it through crawling? Even better, how do we improve the crawling performance by using parallel crawlers tha...
Duen Horng Chau, Shashank Pandit, Samuel Wang, Chr...
HPCA
2005
IEEE
16 years 4 months ago
Scatter-Add in Data Parallel Architectures
Many important applications exhibit large amounts of data parallelism, and modern computer systems are designed to take advantage of it. While much of the computation in the multi...
Jung Ho Ahn, Mattan Erez, William J. Dally
132
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IPPS
2009
IEEE
15 years 11 months ago
Dynamic parallelization for RNA structure comparison
In this paper we describe the parallelization of a dynamic programming algorithm used to find common RNA secondary structures including pseudoknots and similar structures. The se...
Eric Snow, Eric Aubanel, Patricia Evans
IPPS
2009
IEEE
15 years 11 months ago
Parallel reconstruction of neighbor-joining trees for large multiple sequence alignments using CUDA
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
Yongchao Liu, Bertil Schmidt, Douglas L. Maskell