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PPOPP
2012
ACM
13 years 5 months ago
Chestnut: a GPU programming language for non-experts
Graphics processing units (GPUs) are powerful devices capable of rapid parallel computation. GPU programming, however, can be quite difficult, limiting its use to experienced prog...
Andrew Stromme, Ryan Carlson, Tia Newhall
CF
2007
ACM
15 years 1 months ago
Parallel genomic sequence-search on a massively parallel system
In the life sciences, genomic databases for sequence search have been growing exponentially in size. As a result, faster sequencesearch algorithms to search these databases contin...
Oystein Thorsen, Brian E. Smith, Carlos P. Sosa, K...
APCSAC
2007
IEEE
15 years 4 months ago
Open Issues in MPI Implementation
MPI (the Message Passing Interface) continues to be the dominant programming model for parallel machines of all sizes, from small Linux clusters to the largest parallel supercomput...
Rajeev Thakur, William Gropp
ISHPC
1997
Springer
15 years 2 months ago
Implementing Iterative Solvers for Irregular Sparse Matrix Problems in High Performance Fortran
Abstract. Writing e cient iterative solvers for irregular, sparse matrices in HPF is hard. The locality in the computations is unclear, and for e ciency we use storage schemes that...
Eric de Sturler, Damian Loher
CCGRID
2001
IEEE
15 years 1 months ago
xBSP: An Efficient BSP Implementation for clan
Virtual Interface Architecture(VIA) is a light-weight protocol for protected user-level zero-copy communication. In spite of high performance of VIA, the previous MPI implementati...
Yang-Suk Kee, Soonhoi Ha