Heterogeneous networks of computers have rapidly become a very promising commodity computing solution, expected to play a major role in the design of high performance computing sy...
Pairwise sequence alignment is a fundamental operation for homology search in bioinformatics. For two DNA or protein sequences of length ¢ and £ , full-matrix (FM), dynamic prog...
Adrian Driga, Paul Lu, Jonathan Schaeffer, Duane S...
Application run-time information is a fundamental component in application and job scheduling. However, accurate predictions of run times are difficult to achieve for parallel app...
Computing large multiple protein sequence alignments using progressive alignment tools such as ClustalW requires several hours on state-of-the-art workstations. ClustalW uses a th...
One of the most commonly used tools by computational biologists is some form of sequence alignment. Heuristic alignment algorithms developed for speed and their multiple results s...