An optimizing compiler has a hard time to generate a code which will perform at top speed for an arbitrary data set size. In general, the low level optimization process must take i...
Abstract--A hybrid MPI/Pthreads parallelization was implemented in the RAxML phylogenetics code. New MPI code was added to the existing Pthreads production code to exploit parallel...
Background: Many analyses of microarray association studies involve permutation, bootstrap resampling and crossvalidation, that are ideally formulated as embarrassingly parallel c...
Ivo D. Shterev, Sin-Ho Jung, Stephen L. George, Ko...
In a chip-multiprocessor (CMP) system, the DRAM system is shared among cores. In a shared DRAM system, requests from a thread can not only delay requests from other threads by cau...
When there are multiple queries posed to the resourceconstrained wireless sensor network, it is critical to process them efficiently. In this paper, we propose a Two-Tier Multipl...