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IJIT
2004
14 years 11 months ago
Parallezation Protein Sequence Similarity Algorithms using Remote Method Interface
One of the major problems in genomic field is to perform sequence comparison on DNA and protein sequences. Executing sequence comparison on the DNA and protein data is a computatio...
Mubarak Saif Mohsen, Zurinahni Zainol, Rosalina Ab...
EUROPAR
2008
Springer
14 years 11 months ago
Parametric Studies in Eclipse with TAU and PerfExplorer
Abstract. With support for C/C++, Fortran, MPI, OpenMP, and performance tools, the Eclipse integrated development environment (IDE) is a serious contender as a programming environm...
Kevin A. Huck, Wyatt Spear, Allen D. Malony, Samee...
IPPS
2000
IEEE
15 years 2 months ago
Online Computation of Critical Paths for Multithreaded Languages
We have developed an instrumentation scheme that enables programs written in multithreaded languages to compute a critical path at run time.Our scheme gives not only the length (ex...
Yoshihiro Oyama, Kenjiro Taura, Akinori Yonezawa
FCCM
2008
IEEE
212views VLSI» more  FCCM 2008»
15 years 4 months ago
Map-reduce as a Programming Model for Custom Computing Machines
The map-reduce model requires users to express their problem in terms of a map function that processes single records in a stream, and a reduce function that merges all mapped out...
Jackson H. C. Yeung, C. C. Tsang, Kuen Hung Tsoi, ...
IJHPCA
2007
114views more  IJHPCA 2007»
14 years 9 months ago
An Approach To Data Distributions in Chapel
A key characteristic of today’s high performance computing systems is a physically distributed memory, which makes the efficient management of locality essential for taking adv...
R. E. Diaconescu, Hans P. Zima