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» Parallel Programming Using Skeleton Functions
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BMCBI
2008
89views more  BMCBI 2008»
14 years 9 months ago
R/parallel - speeding up bioinformatics analysis with R
Background: R is the preferred tool for statistical analysis of many bioinformaticians due in part to the increasing number of freely available analytical methods. Such methods ca...
Gonzalo Vera, Ritsert C. Jansen, Remo Suppi
MIDDLEWARE
2009
Springer
15 years 4 months ago
Automatic Generation of Network Protocol Gateways
The emergence of networked devices in the home has made it possible to develop applications that control a variety of household functions. However, current devices communicate via ...
Yérom-David Bromberg, Laurent Réveil...
102
Voted
IPPS
2006
IEEE
15 years 3 months ago
Multiple sequence alignment by quantum genetic algorithm
In this paper we describe a new approach for the well known problem in bioinformatics: Multiple Sequence Alignment (MSA). MSA is fundamental task as it represents an essential pla...
L. Abdesslem, M. Soham, B. Mohamed
PDCAT
2009
Springer
15 years 4 months ago
A Speculative Technique for Auto-Memoization Processor with Multithreading
—We have proposed an auto-memoization processor. This processor automatically and dynamically memoizes both functions and loop iterations, and skips their execution by reusing th...
Yushi Kamiya, Tomoaki Tsumura, Hiroshi Matsuo, Yas...
75
Voted
ISHPC
1997
Springer
15 years 1 months ago
Implementing Iterative Solvers for Irregular Sparse Matrix Problems in High Performance Fortran
Abstract. Writing e cient iterative solvers for irregular, sparse matrices in HPF is hard. The locality in the computations is unclear, and for e ciency we use storage schemes that...
Eric de Sturler, Damian Loher