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DASFAA
2008
IEEE
168views Database» more  DASFAA 2008»
15 years 4 months ago
SemanticTwig: A Semantic Approach to Optimize XML Query Processing
Twig pattern matching (TPM) is the core operation of XML query processing. Existing approaches rely on either efficient data structures or novel labeling/indexing schemes to reduce...
Zhifeng Bao, Tok Wang Ling, Jiaheng Lu, Bo Chen
VLDB
2007
ACM
147views Database» more  VLDB 2007»
15 years 10 months ago
A General Framework for Modeling and Processing Optimization Queries
An optimization query asks for one or more data objects that maximize or minimize some function over the data set. We propose a general class of queries, model-based optimization ...
Michael Gibas, Ning Zheng, Hakan Ferhatosmanoglu
ICPPW
2009
IEEE
14 years 7 months ago
A Scalable Parallel Approach for Peptide Identification from Large-Scale Mass Spectrometry Data
Identifying peptides, which are short polymeric chains of amino acid residues in a protein sequence, is of fundamental importance in systems biology research. The most popular appr...
Gaurav Ramesh Kulkarni, Ananth Kalyanaraman, Willi...
ICDE
1999
IEEE
113views Database» more  ICDE 1999»
15 years 11 months ago
Capability-Sensitive Query Processing on Internet Sources
On the Internet, the limited query-processing capabilities of sources make answering even the simplest queries challenging. In this paper, we present a scheme called GenCompact fo...
Hector Garcia-Molina, Wilburt Labio, Ramana Yernen...
BMCBI
2008
204views more  BMCBI 2008»
14 years 10 months ago
EST2uni: an open, parallel tool for automated EST analysis and database creation, with a data mining web interface and microarra
Background: Expressed sequence tag (EST) collections are composed of a high number of single-pass, redundant, partial sequences, which need to be processed, clustered, and annotat...
Javier Forment, Francisco Gilabert Villamón...