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ICPP
1996
IEEE
15 years 1 months ago
On the Scalability of 2-D Wavelet Transform Algorithms on Fine-grained Parallel Machines
: We study the scalability of 2-D discrete wavelet transform algorithms on fine-grained parallel architectures. The principal operation in the 2-D DWT is the filtering operation us...
Jamshed N. Patel, Ashfaq A. Khokhar, Leah H. Jamie...
IPPS
2003
IEEE
15 years 3 months ago
Parallel Heterogeneous Genetic Algorithms for Continuous Optimization
In this paper we address the physical parallelization of a very efficient genetic algorithm (GA) known as gradual distributed real-coded GA (GD-RCGA). This search model naturally...
Enrique Alba, Francisco Luna, Antonio J. Nebro
IPPS
2008
IEEE
15 years 4 months ago
Parallelized preprocessing algorithms for high-density oligonucleotide arrays
Studies of gene expression using high-density oligonucleotide microarrays have become standard in a variety of biological contexts. The data recorded using the microarray techniqu...
Markus Schmidberger, Ulrich Mansmann
IPPS
2002
IEEE
15 years 2 months ago
Parallel Out-of-Core Algorithm for Genome-Scale Enumeration of Metabolic Systemic Pathways
Systemic pathways-oriented approaches to analysis of metabolic networks are effective for small networks but are computationally infeasible for genome scale networks. Current comp...
Nagiza F. Samatova, Al Geist, George Ostrouchov, A...
IPPS
2009
IEEE
15 years 4 months ago
Implementing protein seed-based comparison algorithm on the SGI RASC-100 platform
This paper describes a parallel FPGA implementation of a genomic sequence comparison algorithm for finding similarities between a large set of protein sequences and full genomes....
Van Hoa Nguyen, Alexandre Cornu, Dominique Lavenie...