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IPPS
2009
IEEE
15 years 8 months ago
Long time-scale simulations of in vivo diffusion using GPU hardware
To address the problem of performing long time simulations of biochemical pathways under in vivo cellular conditions, we have developed a lattice-based, reaction-diffusion model t...
Elijah Roberts, John E. Stone, Leonardo Sepulveda,...
IPPS
2005
IEEE
15 years 7 months ago
COTS Clusters vs. the Earth Simulator: An Application Study Using IMPACT-3D
In 2002, Japan announced the Earth Simulator—a supercomputer based on low-volume vector processors and a custom network—and reported that computational scientists had used it ...
Daniel G. Chavarría-Miranda, Guohua Jin, Jo...
GRID
2010
Springer
14 years 11 months ago
Dynamic Partitioning of GATE Monte-Carlo Simulations on EGEE
Abstract The EGEE grid offers the necessary infrastructure and resources for reducing the running time of particle tracking Monte-Carlo applications like GATE. However, efforts are...
Sorina Camarasu-Pop, Tristan Glatard, Jakub T. Mos...
ICS
2005
Tsinghua U.
15 years 7 months ago
Power-aware resource allocation in high-end systems via online simulation
Traditionally, scheduling in high-end parallel systems focuses on how to minimize the average job waiting time and on how to maximize the overall system utilization. Despite the d...
Barry Lawson, Evgenia Smirni
IPPS
2006
IEEE
15 years 8 months ago
Wrekavoc: a tool for emulating heterogeneity
Computer science and especially heterogeneous distributed computing is an experimental science. Simulation, emulation, or in-situ implementation are complementary methodologies to...
Louis-Claude Canon, Emmanuel Jeannot