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198
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ICS
2010
Tsinghua U.
16 years 7 days ago
Overlapping communication and computation by using a hybrid MPI/SMPSs approach
– Communication overhead is one of the dominant factors that affect performance in high-performance computing systems. To reduce the negative impact of communication, programmers...
Vladimir Marjanovic, Jesús Labarta, Eduard ...
192
Voted
COLCOM
2009
IEEE
16 years 5 days ago
DiSK: A distributed shared disk cache for HPC environments
Abstract—Data movement within high performance environments can be a large bottleneck to the overall performance of programs. With the addition of continuous storage and usage of...
Brandon Szeliga, Tung Nguyen, Weisong Shi
SC
2009
ACM
16 years 3 days ago
Cloud technologies for bioinformatics applications
Executing large number of independent tasks or tasks that perform minimal inter-task communication in parallel is a common requirement in many domains. In this paper, we present o...
Xiaohong Qiu, Jaliya Ekanayake, Scott Beason, Thil...
FPL
2009
Springer
99views Hardware» more  FPL 2009»
16 years 2 days ago
Exploiting fast carry-chains of FPGAs for designing compressor trees
Fast carry chains featuring dedicated adder circuitry is a distinctive feature of modern FPGAs. The carry chains bypass the general routing network and are embedded in the logic b...
Hadi Parandeh-Afshar, Philip Brisk, Paolo Ienne
ICS
2009
Tsinghua U.
16 years 1 days ago
Single-particle 3d reconstruction from cryo-electron microscopy images on GPU
Single-particle 3D reconstruction from cryo-electron microscopy (cryo-EM) images is a kernel application of biological molecules analysis, as the computational requirement of whic...
Guangming Tan, Ziyu Guo, Mingyu Chen, Dan Meng