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ISCAPDCS
2003
15 years 5 months ago
Parallel Relative Debugging with Dynamic Data Structures
This paper discusses the use of “relative debugging” as a technique for locating errors in a program that has been ported or developed using evolutionary software engineering ...
David Abramson, Raphael A. Finkel, Donny Kurniawan...
ALGORITHMICA
2006
163views more  ALGORITHMICA 2006»
15 years 3 months ago
Building Large Phylogenetic Trees on Coarse-Grained Parallel Machines
Phylogenetic analysis is an area of computational biology concerned with the reconstruction of evolutionary relationships between organisms, genes, and gene families. Maximum likel...
Thomas M. Keane, Andrew J. Page, Thomas J. Naughto...
147
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PROCEDIA
2010
154views more  PROCEDIA 2010»
14 years 10 months ago
Parallel computation of phylogenetic consensus trees
The field of bioinformatics is witnessing a rapid and overwhelming accumulation of molecular sequence data, predominantly driven by novel wet-lab sequencing techniques. This trend...
Andre J. Aberer, Nicholas D. Pattengale, Alexandro...
JCB
2000
101views more  JCB 2000»
15 years 3 months ago
Evaluation Measures of Multiple Sequence Alignments
Multiple sequence alignments (MSAs) are frequently used in the study of families of protein sequences or DNA/RNA sequences. They are a fundamental tool for the understanding of th...
Gaston H. Gonnet, Chantal Korostensky, Steven A. B...
GECCO
2005
Springer
135views Optimization» more  GECCO 2005»
15 years 9 months ago
Parameter sweeps for exploring GP parameters
This paper describes our procedure and a software application for conducting large parameter sweep experiments in genetic and evolutionary computation research. Both procedure and...
Michael E. Samples, Jason M. Daida, Matthew J. Byo...