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» Parallelism in Gene Assembly
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IPPS
2010
IEEE
14 years 7 months ago
Scalable parallel I/O alternatives for massively parallel partitioned solver systems
Abstract--With the development of high-performance computing, I/O issues have become the bottleneck for many massively parallel applications. This paper investigates scalable paral...
Jing Fu, Ning Liu, Onkar Sahni, Kenneth E. Jansen,...
101
Voted
BMCBI
2004
106views more  BMCBI 2004»
14 years 9 months ago
ESTIMA, a tool for EST management in a multi-project environment
Background: Single-pass, partial sequencing of complementary DNA (cDNA) libraries generates thousands of chromatograms that are processed into high quality expressed sequence tags...
Charu G. Kumar, Richard LeDuc, George Gong, Levan ...
CLUSTER
2007
IEEE
15 years 4 months ago
High throughput grid computing with an IBM Blue Gene/L
Jason Cope, Michael Oberg, Henry M. Tufo, Theron V...
75
Voted
IPPS
2006
IEEE
15 years 3 months ago
Parallel implementation of a quartet-based algorithm for phylogenetic analysis
This paper describes a parallel implementation of our recently developed algorithm for phylogenetic analysis on the IBM BlueGene/L cluster [15]. This algorithm constructs evolutio...
Bing Bing Zhou, Daniel Chu, Monther Tarawneh, Ping...
EUROPAR
2003
Springer
15 years 2 months ago
An Overview of the Blue Gene/L System Software Organization
Abstract. The Blue Gene/L supercomputer will use system-on-a-chip integration and a highly scalable cellular architecture. With 65,536 compute nodes, Blue Gene/L represents a new l...
George Almási, Ralph Bellofatto, José...