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» Parallelism in Gene Assembly
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74
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BMCBI
2010
100views more  BMCBI 2010»
14 years 9 months ago
Scaffold filling, contig fusion and comparative gene order inference
Background: There has been a trend in increasing the phylogenetic scope of genome sequencing without finishing the sequence of the genome. Increasing numbers of genomes are being ...
Adriana Muñoz, Chunfang Zheng, Qian Zhu, Vi...
ESCIENCE
2006
IEEE
15 years 3 months ago
An Extended Extremal Optimisation Model for Parallel Architectures
: A relatively new meta-heuristic, known as extremal optimisation (EO), is based on the evolutionary science notion that poorly performing genes of an individual are replaced by ra...
Marcus Randall, Andrew Lewis
PPSN
2000
Springer
15 years 1 months ago
Optimization as Side-Effect of Evolving Allelopathic Diversity
Many bacteria carry gene complexes that code for a toxin-antidote pair, e.g. colicin systems. Such gene complexes can be advantageous for its host by killing competitor bacteria wh...
Ludo Pagie, Paulien Hogeweg
120
Voted
BMCBI
2008
220views more  BMCBI 2008»
14 years 9 months ago
Gene prediction in metagenomic fragments: A large scale machine learning approach
Background: Metagenomics is an approach to the characterization of microbial genomes via the direct isolation of genomic sequences from the environment without prior cultivation. ...
Katharina J. Hoff, Maike Tech, Thomas Lingner, Rol...
BMCBI
2006
142views more  BMCBI 2006»
14 years 9 months ago
Correlated fragile site expression allows the identification of candidate fragile genes involved in immunity and associated with
Background: Common fragile sites (cfs) are specific regions in the human genome that are particularly prone to genomic instability under conditions of replicative stress. Several ...
Angela Re, Davide Corà, Alda Maria Puliti, ...