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» Parallelism in Gene Assembly
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IPPS
2006
IEEE
15 years 3 months ago
A study of MPI performance analysis tools on Blue Gene/L
Applications on todays massively parallel supercomputers rely on performance analysis tools to guide them toward scalable performance on thousands of processors. However, conventi...
I-Hsin Chung, Robert Walkup, Hui-Fang Wen, Hao Yu
BMCBI
2008
118views more  BMCBI 2008»
14 years 9 months ago
PseudoGeneQuest - Service for identification of different pseudogene types in the human genome
Background: Pseudogenes, nonfunctional copies of genes, evolve fast due the lack of evolutionary pressures and thus appear in several different forms. PseudoGeneQuest is an online...
Csaba P. Ortutay, Mauno Vihinen
CEC
2005
IEEE
14 years 11 months ago
DNA implementation of k-shortest paths computation
In this paper, a demonstration of DNA computing for k-shortest paths of a weighted graph is realized by biochemical experiments in such a way that every path is encoded by oligonuc...
Zuwairie Ibrahim, Yusei Tsuboi, Mohd Saufee Muhamm...
BMCBI
2010
128views more  BMCBI 2010»
14 years 9 months ago
VIGOR, an annotation program for small viral genomes
Background: The decrease in cost for sequencing and improvement in technologies has made it easier and more common for the re-sequencing of large genomes as well as parallel seque...
Shiliang Wang, Jaideep P. Sundaram, David Spiro
GECCO
1999
Springer
130views Optimization» more  GECCO 1999»
15 years 2 months ago
Heterochrony and Adaptation in Developing Neural Networks
This paper discusses the simulation results of a model of biological development for neural networks based on a regulatory genome. The model’s results are analyzed using the fra...
Angelo Cangelosi