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» Parallelism in Gene Assembly
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BMCBI
2004
154views more  BMCBI 2004»
14 years 9 months ago
Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells
Background: cDNA microarrays are a powerful means to screen for biologically relevant gene expression changes, but are often limited by their ability to detect small changes accur...
Bin Yao, Sanjay N. Rakhade, Qunfang Li, Sharlin Ah...
VECPAR
2004
Springer
15 years 3 months ago
Automatically Tuned FFTs for BlueGene/L's Double FPU
Abstract. IBM is currently developing the new line of BlueGene/L supercomputers. The top-of-the-line installation is planned to be a 65,536 processors system featuring a peak perfo...
Franz Franchetti, Stefan Kral, Juergen Lorenz, Mar...
IPPS
2002
IEEE
15 years 2 months ago
Parallel EST Clustering
Expressed sequence tags, abbreviated ESTs, are DNA fragments experimentally derived from expressed portions of genes. Clustering of ESTs is essential for gene recognition and unde...
Anantharaman Kalyanaraman, Srinivas Aluru, Suresh ...
ESA
2001
Springer
105views Algorithms» more  ESA 2001»
15 years 2 months ago
SNPs Problems, Complexity, and Algorithms
Abstract. Single nucleotide polymorphisms (SNPs) are the most frequent form of human genetic variation. They are of fundamental importance for a variety of applications including m...
Giuseppe Lancia, Vineet Bafna, Sorin Istrail, Ross...
GI
2009
Springer
15 years 2 months ago
Massively-Parallel Simulation of Biochemical Systems
: Understanding biological evolution prompts for a detailed understanding of the realized phenotype. Biochemical and gene regulatory dynamics are a cornerstone for the physiology o...
Jens Ackermann, Paul Baecher, Thorsten Franzel, Mi...