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» Parallelism in Gene Assembly
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EUROPAR
2004
Springer
15 years 3 months ago
Implementing MPI on the BlueGene/L Supercomputer
The BlueGene/L supercomputer will consist of 65,536 dual-processor compute nodes interconnected by two high-speed networks: a three-dimensional torus network and a tree topology ne...
George Almási, Charles Archer, José ...
BMCBI
2004
134views more  BMCBI 2004»
14 years 9 months ago
Bayesian model accounting for within-class biological variability in Serial Analysis of Gene Expression (SAGE)
Background: An important challenge for transcript counting methods such as Serial Analysis of Gene Expression (SAGE), "Digital Northern" or Massively Parallel Signature ...
Ricardo Z. N. Vêncio, Helena Brentani, Diogo...
BMCBI
2010
243views more  BMCBI 2010»
14 years 10 months ago
Comparative study of unsupervised dimension reduction techniques for the visualization of microarray gene expression data
Background: Visualization of DNA microarray data in two or three dimensional spaces is an important exploratory analysis step in order to detect quality issues or to generate new ...
Christoph Bartenhagen, Hans-Ulrich Klein, Christia...
BMCBI
2008
133views more  BMCBI 2008»
14 years 10 months ago
A Web-based and Grid-enabled dChip version for the analysis of large sets of gene expression data
Background: Microarray techniques are one of the main methods used to investigate thousands of gene expression profiles for enlightening complex biological processes responsible f...
Luca Corradi, Marco Fato, Ivan Porro, Silvia Scagl...
GECCO
2008
Springer
103views Optimization» more  GECCO 2008»
14 years 11 months ago
Empirical investigations on parallel competent genetic algorithms
This paper empirically investigates parallel competent genetic algorithms (cGAs) [4]. cGAs, such as BOA [21], LINCGA [15], D5 -GA [28], can solve GA-difficult problems by automati...
Miwako Tsuji, Masaharu Munetomo, Kiyoshi Akama