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EUROPAR
2010
Springer
14 years 11 months ago
Multithreaded Geant4: Semi-automatic Transformation into Scalable Thread-Parallel Software
This work presents an application case study. Geant4 is a 750,000 line toolkit first designed in the mid-1990s and originally intended only for sequential computation. Intel's...
Xin Dong 0004, Gene Cooperman, John Apostolakis
PADS
2009
ACM
15 years 4 months ago
Scalable Time Warp on Blue Gene Supercomputers
Abstract—In this paper we illustrate scalable parallel performance for the Time Warp synchronization protocol on the L and P variants of the IBM Blue Gene supercomputer. Scalable...
David W. Bauer, Christopher D. Carothers, Akintayo...
IPPS
2006
IEEE
15 years 3 months ago
Topology-aware task mapping for reducing communication contention on large parallel machines
Communication latencies constitute a significant factor in the performance of parallel applications. With techniques such as wormhole routing, the variation in no-load latencies ...
T. Agarwal, Amit Sharma, A. Laxmikant, Laxmikant V...
CAP
2010
14 years 4 months ago
Parallel disk-based computation for large, monolithic binary decision diagrams
Binary Decision Diagrams (BDDs) are widely used in formal verification. They are also widely known for consuming large amounts of memory. For larger problems, a BDD computation wi...
Daniel Kunkle, Vlad Slavici, Gene Cooperman
BMCBI
2005
141views more  BMCBI 2005»
14 years 9 months ago
Construction and validation of the APOCHIP, a spotted oligo-microarray for the study of beta-cell apoptosis
Background: Type 1 diabetes mellitus (T1DM) is a autoimmune disease caused by a long-term negative balance between immune-mediated beta-cell damage and beta-cell repair/regenerati...
Nils E. Magnusson, Alessandra K. Cardozo, Mogens K...