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» Parallelism in Gene Assembly
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BIOINFORMATICS
2012
13 years 4 days ago
SSuMMo: rapid analysis, comparison and visualization of microbial communities
Motivation: Next-generation sequencing methods are generating increasingly massive datasets, yet still do not fully capture genetic diversity in the richest environments. To under...
Alex L. B. Leach, James P. J. Chong, Kelly R. Rede...
BMCBI
2007
132views more  BMCBI 2007»
14 years 9 months ago
Analysis of probe level patterns in Affymetrix microarray data
Background: Microarrays have been used extensively to analyze the expression profiles for thousands of genes in parallel. Most of the widely used methods for analyzing Affymetrix ...
Alexander C. Cambon, Abdelnaby Khalyfa, Nigel G. F...
BMCBI
2005
95views more  BMCBI 2005»
14 years 9 months ago
Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast
Background: In a genetic interaction, the phenotype of a double mutant differs from the combined phenotypes of the underlying single mutants. When the single mutants have no growt...
Ping Ye, Brian D. Peyser, Forrest A. Spencer, Joel...
ICMCS
2007
IEEE
144views Multimedia» more  ICMCS 2007»
15 years 4 months ago
A Framework for Modular Signal Processing Systems with High-Performance Requirements
This paper introduces the software framework MMER Lab which allows an effective assembly of modular signal processing systems optimized for memory efficiency and performance. Our...
Lukas Diduch, Ronald Müller, Gerhard Rigoll
CEC
2009
IEEE
15 years 1 months ago
JubiTool: Unified design flow for the Perplexus SIMD hardware accelerator
This paper presents a new unified design flow developed within the Perplexus project that aims to accelerate parallelizable data-intensive applications in the context of ubiquitous...
Olivier Brousse, Jérémie Guillot, Th...