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» Parallelism in Structured Newton Computations
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BMCBI
2010
189views more  BMCBI 2010»
14 years 10 months ago
Efficient parallel and out of core algorithms for constructing large bi-directed de Bruijn graphs
Background: Assembling genomic sequences from a set of overlapping reads is one of the most fundamental problems in computational biology. Algorithms addressing the assembly probl...
Vamsi Kundeti, Sanguthevar Rajasekaran, Hieu Dinh,...
IPPS
2000
IEEE
15 years 2 months ago
PaDDMAS: Parallel and Distributed Data Mining Application Suite
Discovering complex associations, anomalies and patterns in distributed data sets is gaining popularity in a range of scientific, medical and business applications. Various algor...
Omer F. Rana, David W. Walker, Maozhen Li, Steven ...
PPOPP
2010
ACM
15 years 4 months ago
Thread to strand binding of parallel network applications in massive multi-threaded systems
In processors with several levels of hardware resource sharing, like CMPs in which each core is an SMT, the scheduling process becomes more complex than in processors with a singl...
Petar Radojkovic, Vladimir Cakarevic, Javier Verd&...
ERSHOV
2006
Springer
15 years 1 months ago
Streaming Networks for Coordinating Data-Parallel Programs
A new coordination language for distributed data-parallel programs is presented, call SNet. The intention of SNet is to introduce advanced structuring techniques into a coordinatio...
Clemens Grelck, Sven-Bodo Scholz, Alexander V. Sha...
ICPADS
2005
IEEE
15 years 3 months ago
A Model for Distributing and Querying a Data Warehouse on a Computing Grid
Data warehouses store large volumes of data according to a multidimensional model with dimensions representing different axes of analysis. OLAP systems (OnLine Analytical Processi...
Pascal Wehrle, Maryvonne Miquel, Anne Tchounikine