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CAINE
2008
15 years 5 months ago
Parallel Assembler for Fuzzy Genome Sequence Assembly
Assembly is an NP-Hard problem, which involves comparing fragments that have a time complexity of O(n2 ). This paper presents a parallel approach for sequence assembly. The parall...
Sara Nasser, Adrienne Breland, Frederick C. Harris...
130
Voted
SNPD
2003
15 years 5 months ago
Semantics of Minimally Synchronous Parallel ML
This paper presents a new functional parallel language: Minimally Synchronous Parallel ML. The execution time can then be estimated and dead-locks and indeterminism are avoided. I...
Myrto Arapinis, Frédéric Loulergue, ...
IPPS
2006
IEEE
15 years 10 months ago
Parallel FPGA-based all-pairs shortest-paths in a directed graph
With rapid advances in VLSI technology, Field Programmable Gate Arrays (FPGAs) are receiving the attention of the Parallel and High Performance Computing community. In this paper,...
Uday Bondhugula, Ananth Devulapalli, Joseph Fernan...
ICPP
1999
IEEE
15 years 8 months ago
Parallel Media Processors for the Billion-Transistor Era
This paper describes the challenges presented by singlechip parallel media processors (PMPs). These machines integrate multiple parallel function units, instruction execution, and...
Jason Fritts, Zhao Wu, Wayne Wolf
146
Voted
IEEEPACT
1999
IEEE
15 years 8 months ago
In Search of Speculative Thread-Level Parallelism
This paper focuses on the problem of how to find and effectively exploit speculative thread-level parallelism. Our studies show that speculating only on loops does not yield suffi...
Jeffrey T. Oplinger, David L. Heine, Monica S. Lam