Abstract. A network of reactions is a commonly used paradigm for representing knowledge about a biological process. How does one understand such generic networks and answer queries...
Ashish Tiwari, Carolyn L. Talcott, Merrill Knapp, ...
Recently, there has been growing interest in the modelling and simulation of biological systems. Such systems are often modelled in terms of coupled ordinary differential equation...
Background: Phenomenological information about regulatory interactions is frequently available and can be readily converted to Boolean models. Fully quantitative models, on the ot...
—In this paper we propose the use of answer set programming (ASP) to model protein interaction networks. We argue that this declarative formalism rivals the popular boolean netwo...
Timur Fayruzov, Martine De Cock, Chris Cornelis, D...
—The parameter identification of nonlinear constitutive model of soil mass is based on an inverse analysis procedure, which consists of minimizing the objective function represen...