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BMCBI
2008
140views more  BMCBI 2008»
14 years 12 months ago
FUNYBASE: a FUNgal phYlogenomic dataBASE
Background: The increasing availability of fungal genome sequences provides large numbers of proteins for evolutionary and phylogenetic analyses. However the heterogeneity of data...
Sylvain Marthey, Gabriela Aguileta, Françoi...
EVOW
2009
Springer
15 years 6 months ago
A Memetic Algorithm for Phylogenetic Reconstruction with Maximum Parsimony
The Maximum Parsimony problem aims at reconstructing a phylogenetic tree from DNA, RNA or protein sequences while minimizing the number of evolutionary changes. Much work has been ...
Jean-Michel Richer, Adrien Goëffon, Jin-Kao H...
CEC
2009
IEEE
15 years 6 months ago
Differential Evolution with Laplace mutation operator
— Differential Evolution (DE) is a novel evolutionary approach capable of handling non-differentiable, non-linear and multi-modal objective functions. DE has been consistently ra...
Millie Pant, Radha Thangaraj, Ajith Abraham, Crina...
CEC
2009
IEEE
15 years 6 months ago
Theoretical analysis of rank-based mutation - combining exploration and exploitation
— Parameter setting is an important issue in the design of evolutionary algorithms. Recently, experimental work has pointed out that it is often not useful to work with a fixed ...
Pietro Simone Oliveto, Per Kristian Lehre, Frank N...
ICPP
2009
IEEE
15 years 6 months ago
Load Balance in the Phylogenetic Likelihood Kernel
—Recent advances in DNA sequencing techniques have led to an unprecedented accumulation and availability of molecular sequence data that needs to be analyzed. This data explosion...
Alexandros Stamatakis, Michael Ott