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» PathSys: integrating molecular interaction graphs for system...
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BMCBI
2006
129views more  BMCBI 2006»
14 years 9 months ago
A literature-based similarity metric for biological processes
Background: Recent analyses in systems biology pursue the discovery of functional modules within the cell. Recognition of such modules requires the integrative analysis of genome-...
Monica Chagoyen, Pedro Carmona-Saez, Concha Gil, J...
CSB
2005
IEEE
206views Bioinformatics» more  CSB 2005»
15 years 3 months ago
Bioinformatic Insights from Metagenomics through Visualization
Cutting-edge biological and bioinformatics research seeks a systems perspective through the analysis of multiple types of high-throughput and other experimental data for the same ...
Susan L. Havre, Bobbie-Jo M. Webb-Robertson, Anuj ...
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BIOINFORMATICS
2005
96views more  BIOINFORMATICS 2005»
14 years 9 months ago
BioLingua: a programmable knowledge environment for biologists
BioLingua is an interactive, web-based programming environment that enables biologists to analyze biological systems by combining knowledge and data through direct end-user progra...
J. P. Massar, Michael Travers, Jeff Elhai, Jeff Sh...
VLDB
2004
ACM
143views Database» more  VLDB 2004»
15 years 2 months ago
GPX: Interactive Mining of Gene Expression Data
Discovering co-expressed genes and coherent expression patterns in gene expression data is an important data analysis task in bioinformatics research and biomedical applications. ...
Daxin Jiang, Jian Pei, Aidong Zhang
PSB
2001
14 years 11 months ago
PIES, A Protein Interaction Extraction System
We consider the problem of extracting, manipulating, and managing biological pathways, especially protein-protein interaction pathways. We discuss here the Protein Interaction Ext...
Limsoon Wong