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CSB
2005
IEEE
129views Bioinformatics» more  CSB 2005»
15 years 3 months ago
A Pivoting Algorithm for Metabolic Networks in the Presence of Thermodynamic Constraints
A linear programming algorithm is presented to constructively compute thermodynamically feasible fluxes and change in chemical potentials of reactions for a metabolic network. It...
R. Nigam, S. Liang
BIBE
2009
IEEE
252views Bioinformatics» more  BIBE 2009»
15 years 4 months ago
Multi-Agents System to Model Cell Signalling by Using Fuzzy Cognitive Maps. Application to Computer Simulation of Multiple Myelo
—In order to simulate biological processes, we use multi-agents system. However, modelling cell behavior in systems biology is complex and may be based on intracellular biochemic...
Vincent Rodin, Gabriel Querrec, Pascal Ballet, Fra...
CSB
2003
IEEE
15 years 3 months ago
A rule-based framework for gene regulation pathways discovery
Bartosz Wilczynski, Torgeir R. Hvidsten, Andriy Kr...
BMCBI
2005
223views more  BMCBI 2005»
14 years 10 months ago
Bioinformatics approaches for cross-species liver cancer analysis based on microarray gene expression profiling
Background: The completion of the sequencing of human, mouse and rat genomes and knowledge of cross-species gene homologies enables studies of differential gene expression in anim...
Hong Fang, Weida Tong, Roger Perkins, Leming M. Sh...
BMCBI
2006
147views more  BMCBI 2006»
14 years 10 months ago
QPath: a method for querying pathways in a protein-protein interaction network
Background: Sequence comparison is one of the most prominent tools in biological research, and is instrumental in studying gene function and evolution. The rapid development of hi...
Tomer Shlomi, Daniel Segal, Eytan Ruppin, Roded Sh...