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» Pathway Logic: Executable Models of Biological Networks
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MEMICS
2010
14 years 6 months ago
Modeling Gene Networks using Fuzzy Logic
Recently, almost uncontrolled technological progress allows so called high-throughput data collection for sophisticated and complex experimental biological systems analysis. Espec...
Artur Gintrowski
91
Voted
BMCBI
2006
141views more  BMCBI 2006»
14 years 11 months ago
Visual setup of logical models of signaling and regulatory networks with ProMoT
Background: The analysis of biochemical networks using a logical (Boolean) description is an important approach in Systems Biology. Recently, new methods have been proposed to ana...
Julio Saez-Rodriguez, Sebastian Mirschel, Rebecca ...
CEC
2009
IEEE
15 years 6 months ago
Gene regulation in a particle metabolome
Abstract— The bacterial genome is well understood by biologists. Although its efficiency and adaptability should make it a good model for evolutionary algorithms, the bacterial ...
Simon J. Hickinbotham, Edward Clark, Susan Stepney...
BMCBI
2005
156views more  BMCBI 2005»
14 years 11 months ago
A new dynamical layout algorithm for complex biochemical reaction networks
Background: To study complex biochemical reaction networks in living cells researchers more and more rely on databases and computational methods. In order to facilitate computatio...
Katja Wegner, Ursula Kummer
97
Voted
BIOCOMP
2006
15 years 1 months ago
Computational Inference of Compound-induced Anti-inflammatory Effects Across Time in an Adjuvant-induced Arthritis Rat Model
A number of diseases, such as arthritis and cardiovascular disorders impacting the lives of many people have strong inflammatory components. To elucidate the antiinflammatory mecha...
Jing Yu, Gabriel Helmlinger, Muriel Saulnier, Anna...