Sciweavers

183 search results - page 19 / 37
» Pathway Logic: Executable Models of Biological Networks
Sort
View
BMCBI
2005
169views more  BMCBI 2005»
14 years 11 months ago
Genetic interaction motif finding by expectation maximization - a novel statistical model for inferring gene modules from synthe
Background: Synthetic lethality experiments identify pairs of genes with complementary function. More direct functional associations (for example greater probability of membership...
Yan Qi 0003, Ping Ye, Joel S. Bader
JAIR
2008
157views more  JAIR 2008»
14 years 11 months ago
Qualitative System Identification from Imperfect Data
Experience in the physical sciences suggests that the only realistic means of understanding complex systems is through the use of mathematical models. Typically, this has come to ...
George Macleod Coghill, Ashwin Srinivasan, Ross D....
BIOWIRE
2007
Springer
15 years 3 months ago
An Artificial Chemistry for Networking
Chemical computing models have been proposed since the 1980ies for expressing concurrent computations in elegant ways for shared memory systems. In this paper we look at the distri...
Thomas Meyer, Lidia Yamamoto, Christian F. Tschudi...
BMCBI
2006
112views more  BMCBI 2006»
14 years 11 months ago
A correlated motif approach for finding short linear motifs from protein interaction networks
Background: An important class of interaction switches for biological circuits and disease pathways are short binding motifs. However, the biological experiments to find these bin...
Soon-Heng Tan, Hugo Willy, Wing-Kin Sung, See-Kion...
LICS
2010
IEEE
14 years 10 months ago
Abstracting the Differential Semantics of Rule-Based Models: Exact and Automated Model Reduction
ing the differential semantics of rule-based models: exact and automated model reduction (Invited Lecture) Vincent Danos∗§, J´erˆome Feret†, Walter Fontana‡, Russell Harme...
Vincent Danos, Jérôme Feret, Walter F...