183 search results - page 4 / 37 » Pathway Logic: Executable Models of Biological Networks |
CMSB
2009
Springer
15 years 6 months ago
2009
Springer
Systems of ordinary differential equations (ODEs) are often used to model the dynamics of complex biological pathways. We construct a discrete state model as a probabilistic appro...
WABI
2009
Springer
15 years 6 months ago
2009
Springer
Background: This paper considers the problem of identifying pathways through metabolic networks that relate to a specific biological response. Our proposed model, HME3M, first ide...
107
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BIBE
2008
IEEE
15 years 1 months ago
2008
IEEE
Bayesian network structure learning is a useful tool for elucidation of regulatory structures of biomolecular pathways. The approach however is limited by its acyclicity constraint...
118
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RECOMB
2006
Springer
15 years 12 months ago
2006
Springer
Abstract. Mapping intra-cellular signaling networks is a critical step in developing an understanding of and treatments for many devastating diseases. The predominant ways of disco...
80
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BMCBI
2008
14 years 11 months ago
2008
Background: A logical model of the known metabolic processes in S. cerevisiae was constructed from iFF708, an existing Flux Balance Analysis (FBA) model, and augmented with inform...