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» Pattern Recognition Using Functions of Multiple Instances
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BMCBI
2006
138views more  BMCBI 2006»
15 years 2 months ago
Determination of strongly overlapping signaling activity from microarray data
Background: As numerous diseases involve errors in signal transduction, modern therapeutics often target proteins involved in cellular signaling. Interpretation of the activity of...
Ghislain Bidaut, Karsten Suhre, Jean-Michel Claver...
137
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BMCBI
2007
168views more  BMCBI 2007»
15 years 2 months ago
GOSim - an R-package for computation of information theoretic GO similarities between terms and gene products
Background: With the increased availability of high throughput data, such as DNA microarray data, researchers are capable of producing large amounts of biological data. During the...
Holger Fröhlich, Nora Speer, Annemarie Poustk...
CP
2001
Springer
15 years 7 months ago
Random 3-SAT and BDDs: The Plot Thickens Further
Abstract. This paper contains an experimental study of the impact of the construction strategy of reduced, ordered binary decision diagrams (ROBDDs) on the average-case computation...
Alfonso San Miguel Aguirre, Moshe Y. Vardi
BMCBI
2008
99views more  BMCBI 2008»
15 years 2 months ago
NestedMICA as an ab initio protein motif discovery tool
Background: Discovering overrepresented patterns in amino acid sequences is an important step in protein functional element identification. We adapted and extended NestedMICA, an ...
Mutlu Dogruel, Thomas A. Down, Tim J. P. Hubbard
ICAPR
2005
Springer
15 years 8 months ago
Unsupervised Markovian Segmentation on Graphics Hardware
Abstract. This contribution shows how unsupervised Markovian segmentation techniques can be accelerated when implemented on graphics hardware equipped with a Graphics Processing Un...
Pierre-Marc Jodoin, Jean-François St-Amour,...