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SODA
2012
ACM
212views Algorithms» more  SODA 2012»
13 years 6 days ago
Parallelism and time in hierarchical self-assembly
We study the role that parallelism plays in time complexariants of Winfree’s abstract Tile Assembly Model (aTAM), a model of molecular algorithmic self-assembly. In the “hiera...
Ho-Lin Chen, David Doty
IPPS
1999
IEEE
15 years 2 months ago
Large Scale Simulation of Parallel Molecular Dynamics
This paper aims to describe the implementation of TAKAKAW, an efficient parallel application for the simulation of molecular dynamics designed to handle large proteins in biology....
Pierre-Eric Bernard, Thierry Gautier, Denis Trystr...
PPL
2008
99views more  PPL 2008»
14 years 9 months ago
A Modular Implementation of Data Structures in Bulk-Synchronous Parallel ML
A functional data-parallel language called BSML has been designed for programming Bulk-Synchronous Parallel algorithms. Many sequential algorithms do not have parallel counterpart...
Frédéric Gava
IPPS
1999
IEEE
15 years 2 months ago
COWL: Copy-On-Write for Logic Programs
In order for parallel logic programming systems to become popular, they should serve the broadest range of applications. To achieve this goal, designers of parallel logic programm...
Vítor Santos Costa
DAGSTUHL
2007
14 years 11 months ago
Parallelism through Digital Circuit Design
Abstract. Two ways to exploit chips with a very large number of transistors are multicore processors and programmable logic chips. Some data parallel algorithms can be executed eï¬...
John O'Donnell