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126
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ICPP
2006
IEEE
15 years 8 months ago
A Parallel, Out-of-Core Algorithm for RNA Secondary Structure Prediction
RNA pseudoknot prediction is an algorithm for RNA sequence search and alignment. An important building block towards pseudoknot prediction is RNA secondary structure prediction. T...
Wenduo Zhou, David K. Lowenthal
149
Voted
PVM
2005
Springer
15 years 8 months ago
Calculation of Single-File Diffusion Using Grid-Enabled Parallel Generic Cellular Automata Simulation
Parallel execution of simulation runs has become indispensable in different research areas recently. One of the most promising and powerful models in science are cellular automata ...
Marcus Komann, Christian Kauhaus, Dietmar Fey
131
Voted
PDP
2002
IEEE
15 years 7 months ago
The CDAG: A Data Structure for Automatic Parallelization for a Multithreaded Architecture
Despite the explosive new interest in Distributed Computing, bringing software — particularly legacy software — to parallel platforms remains a daunting task. The Self Distrib...
Bernd Klauer, Frank Eschmann, Ronald Moore, Klaus ...
LCPC
2009
Springer
15 years 7 months ago
A Communication Framework for Fault-Tolerant Parallel Execution
PC grids represent massive computation capacity at a low cost, but are challenging to employ for parallel computing because of variable and unpredictable performance and availabili...
Nagarajan Kanna, Jaspal Subhlok, Edgar Gabriel, Es...
86
Voted
EPIA
1999
Springer
15 years 6 months ago
YapOr: an Or-Parallel Prolog System Based on Environment Copying
YapOr is an or-parallel system that extends the Yap Prolog system to exploit implicit or-parallelism in Prolog programs. It is based on the environment copying model, as first imp...
Ricardo Rocha, Fernando M. A. Silva, Vítor ...