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2000
ACM
15 years 8 months ago
Scalable Molecular Dynamics for Large Biomolecular Systems
We present an optimized parallelization scheme for molecular dynamics simulations of large biomolecular systems, implemented in the production-quality molecular dynamics program N...
Robert Brunner, James C. Phillips, Laxmikant V. Ka...
HCW
1999
IEEE
15 years 8 months ago
Metacomputing with MILAN
The MILAN project, a joint effort involving Arizona State University and New York University, has produced and validated fundamental techniques for the realization of efficient, r...
Arash Baratloo, Partha Dasgupta, Vijay Karamcheti,...
166
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ICPP
1997
IEEE
15 years 8 months ago
Automatic Partitioning of Data and Computations on Scalable Shared Memory Multiprocessors
Abstract—This paper describes an algorithm for deriving data and computation partitions on scalable shared memory multiprocessors. The algorithm establishes affinity relationshi...
Sudarsan Tandri, Tarek S. Abdelrahman
IPPS
1997
IEEE
15 years 8 months ago
Platform-Independent Runtime Optimizations Using OpenThreads
Although platform-independent runtime systems for parallel programming languages are desirable, the need for low-level optimizations usually precludes their existence. This is bec...
Matthew Haines, Koen Langendoen
IPPS
1996
IEEE
15 years 8 months ago
An Element-Based Concurrent Partitioner for Unstructured Finite Element Meshes
A concurrent partitioner for partitioning unstructured finite element meshes on distributed memory architectures is developed. The partitioner uses an element-based partitioning st...
Hong Q. Ding, Robert D. Ferraro