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154
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BMCBI
2007
141views more  BMCBI 2007»
15 years 4 months ago
Using structural motif descriptors for sequence-based binding site prediction
Background: Many protein sequences are still poorly annotated. Functional characterization of a protein is often improved by the identification of its interaction partners. Here, ...
Andreas Henschel, Christof Winter, Wan Kyu Kim, Mi...
136
Voted
CCE
2004
15 years 4 months ago
Improving convergence of the stochastic decomposition algorithm by using an efficient sampling technique
This work focuses on the basic stochastic decomposition (SD) algorithm of Higle and Sen [J.L. Higle, S. Sen, Stochastic Decomposition, Kluwer Academic Publishers, 1996] for two-st...
José María Ponce-Ortega, Vicente Ric...
BMCBI
2010
113views more  BMCBI 2010»
15 years 5 months ago
Improving performance of mammalian microRNA target prediction
Background: MicroRNAs (miRNAs) are single-stranded non-coding RNAs known to regulate a wide range of cellular processes by silencing the gene expression at the protein and/or mRNA...
Hui Liu, Dong Yue, Yidong Chen, Shou-Jiang Gao, Yu...
CVPR
2008
IEEE
16 years 6 months ago
Reduce, reuse & recycle: Efficiently solving multi-label MRFs
In this paper, we present novel techniques that improve the computational and memory efficiency of algorithms for solving multi-label energy functions arising from discrete MRFs o...
Karteek Alahari, Pushmeet Kohli, Philip H. S. Torr
STACS
2010
Springer
15 years 11 months ago
Weakening Assumptions for Deterministic Subexponential Time Non-Singular Matrix Completion
Kabanets and Impagliazzo [KI04] show how to decide the circuit polynomial identity testing problem (CPIT) in deterministic subexponential time, assuming hardness of some explicit ...
Maurice Jansen