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» Performance Prediction of a Parallel Simulator
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159
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COMPGEOM
2003
ACM
15 years 10 months ago
Cost-driven octree construction schemes: an experimental study
Given a scene consisting of objects, ray shooting queries answer with the first object encountered by a given ray, and are used in ray tracing and radiosity for rendering photo-r...
Boris Aronov, Hervé Brönnimann, Allen ...
BMCBI
2006
116views more  BMCBI 2006»
15 years 4 months ago
Optimized mixed Markov models for motif identification
Background: Identifying functional elements, such as transcriptional factor binding sites, is a fundamental step in reconstructing gene regulatory networks and remains a challengi...
Weichun Huang, David M. Umbach, Uwe Ohler, Leping ...
149
Voted
JPDC
2006
81views more  JPDC 2006»
15 years 4 months ago
Implications of virtualization on Grids for high energy physics applications
The simulations used in the field of high energy physics are compute intensive and exhibit a high level of data parallelism. These features make such simulations ideal candidates ...
Laura Gilbert, Jeff Tseng, Rhys Newman, Saeed Iqba...
136
Voted
SCFBM
2008
92views more  SCFBM 2008»
15 years 4 months ago
CRANKITE: A fast polypeptide backbone conformation sampler
Background: CRANKITE is a suite of programs for simulating backbone conformations of polypeptides and proteins. The core of the suite is an efficient Metropolis Monte Carlo sample...
Alexei A. Podtelezhnikov, David L. Wild
SIGCOMM
2004
ACM
15 years 10 months ago
Work-conserving distributed schedulers for Terabit routers
−Buffered multistage interconnection networks offer one of the most scalable and cost-effective approaches to building high capacity routers. Unfortunately, the performance of su...
Prashanth Pappu, Jonathan S. Turner, Kenneth Wong