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RECONFIG
2009
IEEE
182views VLSI» more  RECONFIG 2009»
15 years 4 months ago
Scalability Studies of the BLASTn Scan and Ungapped Extension Functions
BLASTn is a ubiquitous tool used for large scale DNA analysis. Detailed profiling tests reveal that the most computationally intensive sections of the BLASTn algorithm are the sc...
Siddhartha Datta, Ron Sass
102
Voted
CIKM
2009
Springer
15 years 4 months ago
Packing the most onto your cloud
Parallel dataflow programming frameworks such as Map-Reduce are increasingly being used for large scale data analysis on computing clouds. It is therefore becoming important to a...
Ashraf Aboulnaga, Ziyu Wang, Zi Ye Zhang
IEEEPACT
2008
IEEE
15 years 4 months ago
The PARSEC benchmark suite: characterization and architectural implications
This paper presents and characterizes the Princeton Application Repository for Shared-Memory Computers (PARSEC), a benchmark suite for studies of Chip-Multiprocessors (CMPs). Prev...
Christian Bienia, Sanjeev Kumar, Jaswinder Pal Sin...
99
Voted
OOPSLA
2007
Springer
15 years 3 months ago
Software speculative multithreading for Java
We apply speculative multithreading to sequential Java programs in software to achieve speedup on existing multiprocessors. A common speculation library supports both Java bytecod...
Christopher J. F. Pickett
CLUSTER
2005
IEEE
15 years 3 months ago
Near Overhead-free Heterogeneous Thread-migration
Thread migration moves a single call-stack to another machine to improve either load balancing or locality. Current approaches for checkpointing and thread migration are either no...
Ronald Veldema, Michael Philippsen