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» Performance prediction based on inherent program similarity
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BMCBI
2005
125views more  BMCBI 2005»
14 years 11 months ago
DIALIGN-T: An improved algorithm for segment-based multiple sequence alignment
Background: We present a complete re-implementation of the segment-based approach to multiple protein alignment that contains a number of improvements compared to the previous ver...
Amarendran R. Subramanian, Jan Weyer-Menkhoff, Mic...
ISCA
1993
IEEE
153views Hardware» more  ISCA 1993»
15 years 4 months ago
An Adaptive Cache Coherence Protocol Optimized for Migratory Sharing
Parallel programs that use critical sections and are executed on a shared-memory multiprocessor with a writeinvalidate protocol result in invalidation actions that could be elimin...
Per Stenström, Mats Brorsson, Lars Sandberg
HPDC
2008
IEEE
15 years 6 months ago
StoreGPU: exploiting graphics processing units to accelerate distributed storage systems
Today Graphics Processing Units (GPUs) are a largely underexploited resource on existing desktops and a possible costeffective enhancement to high-performance systems. To date, mo...
Samer Al-Kiswany, Abdullah Gharaibeh, Elizeu Santo...
KDD
2001
ACM
203views Data Mining» more  KDD 2001»
16 years 7 days ago
Ensemble-index: a new approach to indexing large databases
The problem of similarity search (query-by-content) has attracted much research interest. It is a difficult problem because of the inherently high dimensionality of the data. The ...
Eamonn J. Keogh, Selina Chu, Michael J. Pazzani
BMCBI
2008
142views more  BMCBI 2008»
14 years 12 months ago
Strategies for measuring evolutionary conservation of RNA secondary structures
Background: Evolutionary conservation of RNA secondary structure is a typical feature of many functional non-coding RNAs. Since almost all of the available methods used for predic...
Andreas R. Gruber, Stephan H. F. Bernhart, Ivo L. ...