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    BMCBI
    2005
    162views more  BMCBI 2005»
    Accelerated probabilistic inference of RNA structure evolution
    14 years 9 months ago
    Accelerated probabilistic inference of RNA structure evolution
    Download  biowiki.org
    Background: Pairwise stochastic context-free grammars (Pair SCFGs) are powerful tools for evolutionary analysis of RNA, including simultaneous RNA sequence alignment and secondary...
    Ian Holmes
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    ISSTA
    2010
    ACM
    208views Software Engineering» more  ISSTA 2010»
    On test repair using symbolic execution
    15 years 1 months ago
    On test repair using symbolic execution
    Download  mir.cs.illinois.edu
    When developers change a program, regression tests can fail not only due to faults in the program but also due to outof-date test code that does not reflect the desired behavior ...
    Brett Daniel, Tihomir Gvero, Darko Marinov
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    BMCBI
    2010
    136views more  BMCBI 2010»
    Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfa
    14 years 9 months ago
    Protein structure analysis of mutations causing inheritable diseases. An e-Science approach with life scientist friendly interfa
    Download  www.biomedcentral.com
    Background: Many newly detected point mutations are located in protein-coding regions of the human genome. Knowledge of their effects on the protein's 3D structure provides i...
    Hanka Venselaar, Tim A. H. te Beek, Remko K. P. Ku...
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    BMCBI
    2008
    135views more  BMCBI 2008»
    Ab-origin: an enhanced tool to identify the sourcing gene segments in germline for rearranged antibodies
    14 years 9 months ago
    Ab-origin: an enhanced tool to identify the sourcing gene segments in germline for rearranged antibodies
    Download  www.biomedcentral.com
    Background: In the adaptive immune system, variable regions of immunoglobulin (IG) are encoded by random recombination of variable (V), diversity (D), and joining (J) gene segment...
    Xiaojing Wang, Di Wu, SiYuan Zheng, Jing Sun, Lin ...
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    BMCBI
    2008
    211views more  BMCBI 2008»
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    14 years 9 months ago
    CUDA compatible GPU cards as efficient hardware accelerators for Smith-Waterman sequence alignment
    Download  www.biomedcentral.com
    Background: Searching for similarities in protein and DNA databases has become a routine procedure in Molecular Biology. The Smith-Waterman algorithm has been available for more t...
    Svetlin Manavski, Giorgio Valle
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