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ICSM
2007
IEEE
15 years 4 months ago
A Maintainable Software Architecture for Fast and Modular Bioinformatics Sequence Search
Bioinformaticists use the Basic Local Alignment Search Tool (BLAST) to characterize an unknown sequence by comparing it against a database of known sequences, thus detecting evolu...
Jeremy S. Archuleta, Eli Tilevich, Wu-chun Feng
HPCC
2007
Springer
15 years 4 months ago
Towards Scalable Event Tracing for High End Systems
Although event tracing of parallel applications offers highly detailed performance information, tracing on current leading edge systems may lead to unacceptable perturbation of the...
Kathryn Mohror, Karen L. Karavanic
102
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GRID
2006
Springer
14 years 10 months ago
Snapshot Processing in Streaming Environments
Monitoring and correlation of streaming data from multiple sources is becoming increasingly important in many application areas. Example applications include automated commodities...
Daniel M. Zimmerman, K. Mani Chandy
IPPS
1998
IEEE
15 years 2 months ago
Memory Hierarchy Management for Iterative Graph Structures
The increasing gap in processor and memory speeds has forced microprocessors to rely on deep cache hierarchies to keep the processors from starving for data. For many applications...
Ibraheem Al-Furaih, Sanjay Ranka
HIPC
2007
Springer
15 years 4 months ago
FT64: Scientific Computing with Streams
This paper describes FT64 and Multi-FT64, single- and multi-coprocessor systems designed for high performance scientific computing with streams. We give a detailed case study of po...
Mei Wen, Nan Wu, Chunyuan Zhang, Wei Wu, Qianming ...