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» Phase4: Automatic Evaluation of Database Search Methods
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BMCBI
2008
130views more  BMCBI 2008»
15 years 2 months ago
A novel series of compositionally biased substitution matrices for comparing Plasmodium proteins
Background: The most common substitution matrices currently used (BLOSUM and PAM) are based on protein sequences with average amino acid distributions, thus they do not represent ...
Kevin Brick, Elisabetta Pizzi
BMCBI
2005
124views more  BMCBI 2005»
15 years 1 months ago
Probabilistic annotation of protein sequences based on functional classifications
: One of the most evident achievements of bioinformatics is the development of methods that transfer biological knowledge from characterised proteins to uncharacterised sequences. ...
Emmanuel D. Levy, Christos A. Ouzounis, Walter R. ...
CIKM
2009
Springer
15 years 8 months ago
Semi-nonnegative matrix factorization with global statistical consistency for collaborative filtering
Collaborative Filtering, considered by many researchers as the most important technique for information filtering, has been extensively studied by both academic and industrial co...
Hao Ma, Haixuan Yang, Irwin King, Michael R. Lyu
ENGL
2008
78views more  ENGL 2008»
15 years 2 months ago
Threshold for Positional Weight Matrix
In biological sequence research, the positional weight matrix (PWM) is often used to search for putative transcription factor binding sites. A set of experimentally verified oligon...
Yunlian Pan, Sieu Phan
WWW
2007
ACM
16 years 2 months ago
Deriving knowledge from figures for digital libraries
Figures in digital documents contain important information. Current digital libraries do not summarize and index information available within figures for document retrieval. We pr...
Xiaonan Lu, James Ze Wang, Prasenjit Mitra, C. Lee...