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» Phylogenetic Comparative Assembly
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BIB
2004
76views more  BIB 2004»
14 years 9 months ago
Comparative genome assembly
Mihai Pop, Adam M. Phillippy, Arthur L. Delcher, S...
93
Voted
CAINE
2008
14 years 11 months ago
Parallel Assembler for Fuzzy Genome Sequence Assembly
Assembly is an NP-Hard problem, which involves comparing fragments that have a time complexity of O(n2 ). This paper presents a parallel approach for sequence assembly. The parall...
Sara Nasser, Adrienne Breland, Frederick C. Harris...
CORR
2010
Springer
126views Education» more  CORR 2010»
14 years 7 months ago
Triangular Self-Assembly
We discuss the self-assembly system of triangular tiles instead of square tiles, in particular right triangular tiles and equilateral triangular tiles. We show that the triangular...
Lila Kari, Shinnosuke Seki, Zhi Xu
99
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NAR
2007
115views more  NAR 2007»
14 years 9 months ago
DroSpeGe: rapid access database for new Drosophila species genomes
The Drosophila species comparative genome database DroSpeGe (http://insects.eugenes.org/ DroSpeGe/) provides genome researchers with rapid, usable access to 12 new and old Drosoph...
Donald G. Gilbert
BMCBI
2007
124views more  BMCBI 2007»
14 years 9 months ago
BranchClust: a phylogenetic algorithm for selecting gene families
Background: Automated methods for assembling families of orthologous genes include those based on sequence similarity scores and those based on phylogenetic approaches. The first ...
Maria S. Poptsova, J. Peter Gogarten