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BMCBI
2008
126views more  BMCBI 2008»
15 years 3 months ago
NITPICK: peak identification for mass spectrometry data
Background: The reliable extraction of features from mass spectra is a fundamental step in the automated analysis of proteomic mass spectrometry (MS) experiments. Results: This co...
Bernhard Y. Renard, Marc Kirchner, Hanno Steen, Ju...
BMCBI
2006
179views more  BMCBI 2006»
15 years 3 months ago
Multiscale Hy3S: Hybrid stochastic simulation for supercomputers
Background: Stochastic simulation has become a useful tool to both study natural biological systems and design new synthetic ones. By capturing the intrinsic molecular fluctuation...
Howard Salis, Vassilios Sotiropoulos, Yiannis N. K...
BMCBI
2005
113views more  BMCBI 2005»
15 years 2 months ago
Pathway level analysis of gene expression using singular value decomposition
Background: A promising direction in the analysis of gene expression focuses on the changes in expression of specific predefined sets of genes that are known in advance to be rela...
John K. Tomfohr, Jun Lu, Thomas B. Kepler
BMCBI
2004
149views more  BMCBI 2004»
15 years 2 months ago
MiCoViTo: a tool for gene-centric comparison and visualization of yeast transcriptome states
Background: Information obtained by DNA microarray technology gives a rough snapshot of the transcriptome state, i.e., the expression level of all the genes expressed in a cell po...
Gaëlle Lelandais, Philippe Marc, Pierre Vince...
DATAMINE
1999
152views more  DATAMINE 1999»
15 years 2 months ago
Discovery of Frequent DATALOG Patterns
Discovery of frequent patterns has been studied in a variety of data mining settings. In its simplest form, known from association rule mining, the task is to discover all frequent...
Luc Dehaspe, Hannu Toivonen