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BMCBI
2010
131views more  BMCBI 2010»
15 years 2 months ago
Prediction of epigenetically regulated genes in breast cancer cell lines
Background: Methylation of CpG islands within the DNA promoter regions is one mechanism that leads to aberrant gene expression in cancer. In particular, the abnormal methylation o...
Leandro A. Loss, Anguraj Sadanandam, Steffen Durin...
BMCBI
2010
156views more  BMCBI 2010»
15 years 2 months ago
PeakAnalyzer: Genome-wide annotation of chromatin binding and modification loci
Background: Functional genomic studies involving high-throughput sequencing and tiling array applications, such as ChIP-seq and ChIP-chip, generate large numbers of experimentally...
Mali Salmon-Divon, Heidi Dvinge, Kairi Tammoja, Pa...
BMCBI
2007
151views more  BMCBI 2007»
15 years 2 months ago
Minimus: a fast, lightweight genome assembler
Background: Genome assemblers have grown very large and complex in response to the need for algorithms to handle the challenges of large whole-genome sequencing projects. Many of ...
Daniel D. Sommer, Arthur L. Delcher, Steven L. Sal...
SAC
2008
ACM
15 years 1 months ago
A hybrid software-based self-testing methodology for embedded processor
Software-based self-test (SBST) is emerging as a promising technology for enabling at-speed testing of high-speed embedded processors testing in an SoC system. For SBST, test rout...
Tai-Hua Lu, Chung-Ho Chen, Kuen-Jong Lee
PVLDB
2010
163views more  PVLDB 2010»
15 years 10 days ago
Geospatial Stream Query Processing using Microsoft SQL Server StreamInsight
Microsoft SQL Server spatial libraries contain several components that handle geometrical and geographical data types. With advances in geo-sensing technologies, there has been an...
Seyed Jalal Kazemitabar, Ugur Demiryurek, Mohamed ...