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» Polynomial algebra of discrete models in systems biology
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AMAST
2000
Springer
15 years 2 months ago
Time and Probability in Process Algebra
In the paper we present an ACP-like process algebra which can be used to model both probabilistic and time behaviour of parallel systems. This process algebra is obtained by extens...
Suzana Andova
COCOA
2011
Springer
13 years 9 months ago
Algorithmic Aspects of Heterogeneous Biological Networks Comparison
Biological networks are commonly used to model molecular activity within the cell. Recent experimental studies have shown that the detection of conserved subnetworks across several...
Guillaume Blin, Guillaume Fertin, Hafedh Mohamed-B...
88
Voted
SIMULATION
2008
139views more  SIMULATION 2008»
14 years 9 months ago
Constitutive Hybrid Processes: a Process-Algebraic Semantics for Hybrid Bond Graphs
Models of physical systems have to be based on physical principles such as conservation of energy and continuity of power. These principles are inherently enforced by the bond gra...
Pieter J. L. Cuijpers, Jan F. Broenink, Pieter J. ...
94
Voted
SMA
2010
ACM
164views Solid Modeling» more  SMA 2010»
14 years 10 months ago
Topologically guaranteed univariate solutions of underconstrained polynomial systems via no-loop and single-component tests
We present an algorithm which robustly computes the intersection curve(s) of an under-constrained piecewise polynomial system consisting of n equations with n + 1 unknowns. The so...
Michael Barton, Gershon Elber, Iddo Hanniel
DNA
2007
Springer
127views Bioinformatics» more  DNA 2007»
15 years 3 months ago
Discrete Simulations of Biochemical Dynamics
Abstract. Metabolic P systems, shortly MP systems, are a special class of P systems, introduced for expressing biological metabolism. Their dynamics are computed by metabolic algor...
Vincenzo Manca