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» Polyphonic Musical Sequence Alignment for Database Search
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APBC
2004
108views Bioinformatics» more  APBC 2004»
14 years 11 months ago
Ladderlike Stepping and Interval Jumping Searching Algorithms for DNA Sequences
In this study we have designed a novel algorithm for searching common segments in multiple DNA sequences. To improve efficiency in pattern searching, combination of hashing encodi...
Tun-Wen Pai, Margaret Dah-Tsyr Chang, Jia-Han Chu,...
RECOMB
2003
Springer
15 years 9 months ago
A multi-expert system for the automatic detection of protein domains from sequence information
We describe a novel method for detecting the domain structure of a protein from sequence information alone. The method is based on analyzing multiple sequence alignments that are ...
Niranjan Nagarajan, Golan Yona
86
Voted
SIGIR
1999
ACM
15 years 1 months ago
Content-Based Retrieval for Music Collections
A content-based retrieval model for tackling the mismatch problems specific to music data is proposed and implemented. The system uses a pitch profile encoding for queries in any ...
Yuen-Hsien Tseng
94
Voted
BMCBI
2008
111views more  BMCBI 2008»
14 years 9 months ago
SciDBMaker: new software for computer-aided design of specialized biological databases
Background: The exponential growth of research in molecular biology has brought concomitant proliferation of databases for stocking its findings. A variety of protein sequence dat...
Riadh Hammami, Abdelmajid Zouhir, Karim Naghmouchi...
85
Voted
RECOMB
2004
Springer
15 years 9 months ago
Designing multiple simultaneous seeds for DNA similarity search
The challenge of similarity search in massive DNA sequence databases has inspired major changes in BLAST-style alignment tools, which accelerate search by inspecting only pairs of...
Yanni Sun, Jeremy Buhler