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» Polyphonic Musical Sequence Alignment for Database Search
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JCDL
2004
ACM
170views Education» more  JCDL 2004»
15 years 2 months ago
Looking for new, not known music only: music retrieval by melody style
With the growth of digital music, content-based music retrieval (CBMR) has attracted increasingly attention. For most CBMR systems, the task is to return music objects similar to ...
Fang-Fei Kuo, Man-Kwan Shan
81
Voted
ICPADS
2005
IEEE
15 years 3 months ago
Exploiting Multi-level Parallelism for Homology Search using General Purpose Processors
New biological experimental techniques are continuing to generate large amounts of data using DNA, RNA, human genome and protein sequences. The quantity and quality of data from t...
Xiandong Meng, Vipin Chaudhary
BMCBI
2006
108views more  BMCBI 2006»
14 years 9 months ago
RibAlign: a software tool and database for eubacterial phylogeny based on concatenated ribosomal protein subunits
Background: Until today, analysis of 16S ribosomal RNA (rRNA) sequences has been the de-facto gold standard for the assessment of phylogenetic relationships among prokaryotes. How...
Hanno Teeling, Frank Oliver Glöckner
IPPS
2005
IEEE
15 years 3 months ago
Comparison of Current BLAST Software on Nucleotide Sequences
The computational power needed for searching exponentially growing databases, such as GenBank, has increased dramatically. Three different implementations of the most widely used ...
I. Elizabeth Cha, Eric C. Rouchka
SIGMOD
2004
ACM
109views Database» more  SIGMOD 2004»
15 years 9 months ago
Piers: An Efficient Model for Similarity Search in DNA Sequence Databases
Growing interest in genomic research has resulted in the creation of huge biological sequence databases. In this paper, we present a hash-based pier model for efficient homology s...
Xia Cao, Shuai Cheng Li, Beng Chin Ooi, Anthony K....