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» Power Iteration Clustering
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ESANN
2006
14 years 11 months ago
Magnification control for batch neural gas
Neural gas (NG) constitutes a very robust clustering algorithm which can be derived as stochastic gradient descent from a cost function closely connected to the quantization error...
Barbara Hammer, Alexander Hasenfuss, Thomas Villma...
AAAI
2010
14 years 10 months ago
A Two-Dimensional Topic-Aspect Model for Discovering Multi-Faceted Topics
This paper presents the Topic-Aspect Model (TAM), a Bayesian mixture model which jointly discovers topics and aspects. We broadly define an aspect of a document as a characteristi...
Michael Paul, Roxana Girju
BMCBI
2010
109views more  BMCBI 2010»
14 years 9 months ago
ParallABEL: an R library for generalized parallelization of genome-wide association studies
Background: Genome-Wide Association (GWA) analysis is a powerful method for identifying loci associated with complex traits and drug response. Parts of GWA analyses, especially th...
Unitsa Sangket, Surakameth Mahasirimongkol, Wasun ...
BMCBI
2008
154views more  BMCBI 2008»
14 years 9 months ago
Bayesian models and meta analysis for multiple tissue gene expression data following corticosteroid administration
Background: This paper addresses key biological problems and statistical issues in the analysis of large gene expression data sets that describe systemic temporal response cascade...
Yulan Liang, Arpad Kelemen
BMCBI
2007
162views more  BMCBI 2007»
14 years 9 months ago
Three-Dimensional Phylogeny Explorer: Distinguishing paralogs, lateral transfer, and violation of "molecular clock" assumption w
Background: Construction and interpretation of phylogenetic trees has been a major research topic for understanding the evolution of genes. Increases in sequence data and complexi...
Namshin Kim, Christopher Lee