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» Power and sample size estimation in microarray studies
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139
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BMCBI
2008
167views more  BMCBI 2008»
15 years 2 months ago
Not proper ROC curves as new tool for the analysis of differentially expressed genes in microarray experiments
Background: Most microarray experiments are carried out with the purpose of identifying genes whose expression varies in relation with specific conditions or in response to enviro...
Stefano Parodi, Vito Pistoia, Marco Muselli
BMCBI
2006
99views more  BMCBI 2006»
15 years 1 months ago
A proposed metric for assessing the measurement quality of individual microarrays
Background: High-density microarray technology is increasingly applied to study gene expression levels on a large scale. Microarray experiments rely on several critical steps that...
Kyoungmi Kim, Grier P. Page, T. Mark Beasley, Step...
145
Voted
BMCBI
2004
154views more  BMCBI 2004»
15 years 1 months ago
Accuracy of cDNA microarray methods to detect small gene expression changes induced by neuregulin on breast epithelial cells
Background: cDNA microarrays are a powerful means to screen for biologically relevant gene expression changes, but are often limited by their ability to detect small changes accur...
Bin Yao, Sanjay N. Rakhade, Qunfang Li, Sharlin Ah...
CORR
2011
Springer
217views Education» more  CORR 2011»
14 years 5 months ago
Coarse-Grained Topology Estimation via Graph Sampling
Many online networks are measured and studied via sampling techniques, which typically collect a relatively small fraction of nodes and their associated edges. Past work in this a...
Maciej Kurant, Minas Gjoka, Yan Wang, Zack W. Almq...
123
Voted
BMCBI
2008
98views more  BMCBI 2008»
15 years 2 months ago
Empirical Bayes models for multiple probe type microarrays at the probe level
Background: When analyzing microarray data a primary objective is often to find differentially expressed genes. With empirical Bayes and penalized t-tests the sample variances are...
Magnus Åstrand, Petter Mostad, Mats Rudemo